Draft 2008 California 303(d)/305(b) Integrated Report

Supporting Information

Regional Board 2 - San Francisco Bay Region

Water Body Name: Arroyo Las Positas
Water Body ID: CAR2043008020010905115005
Water Body Type: River & Stream
 
DECISION ID
7578
 
Pollutant: Nutrient/Eutrophication Biological Indicators
Final Listing Decision: List on 303(d) list (TMDL required list)
Last Listing Cycle's Final Listing Decision: New Decision
Revision Status Revised
Sources: Surface Runoff | Urban Runoff/Storm Sewers
Expected TMDL Completion Date: 2021
Impairment from Pollutant or Pollution: Pollutant
 
Weight of Evidence: This pollutant is being considered for listing under sections 3.2 and 3.11 of the Listing Policy. Under section 3.11, water segments shall be evaluated to determine whether the weight of evidence demonstrates that a water quality standard is not attained.
Four lines of evidence are available in the administrative record to assess this pollutant: (1) low dissolved oxygen measurements from continuous dissolved oxygen records, (2) supersaturated dissolved oxygen measurements from continuous dissolved oxygen records, (3) measurements of nitrate as N concentrations in water, and (4) samples of benthic macroinvertebrate assemblages.
Based on the readily available data for this water body, the weight of evidence indicates that there is sufficient justification available in favor of adding this water segment-pollutant combination to the section 303(d) list in the Water Quality Limited Segments category.
This conclusion is based on the staff findings that:

1. The data concerning current conditions and supporting the listing decision satisfy the data quality requirements of section 6.1.4 of the Policy.

2. The data used satisfy the data quantity requirements of section 6.1.5 of the Policy.

3. Minimum dissolved oxygen measurements were below the warm-water water quality objective of 5 mg/L in 4 out of 9 sampling events. Using table 3.2 of the listing policy, a minimum of 5 exceedances are needed to list this waterbody on the 303(d) list with a minimum sample size of 5. However, additional water quality information indicates that this water body is impaired by low dissolved oxygen levels as a result of widespread eutrophic conditions. Under section 3.11, these additional factors shall be considered in a weight of evidence approach in the decision to list a water body as impaired.

4. Supersaturated dissolved oxygen levels greater than 200% were observed in 5 out of 9 deployments, including a maximum value of 395%, indicating tremendous oxygen production by algae (eutrophication).

5. Eight out of 8 nitrate samples had concentrations greater than the guideline of 0.5 mg/L to prevent nuisance algae growth. Additionally, 8 out of 8 nitrate samples had concentrations greater than the guideline of 2.0 mg/L to protect aquatic life from nitrate toxicity. These high nitrate concentrations can promote the growth of periphyton that can cause nuisance and adversely affect beneficial uses.

6. Benthic macroinvertebrate (BMI) assemblages were significantly altered relative to reference conditions, indicating that controllable water quality factors have resulted in significant alterations in the community ecology of receiving waters. These alterations are most likely the result of low levels of dissolved oxygen, which is a result of eutrophication. Of the 6 sites where BMI were sampled, dissolved oxygen was also measured at 4 sites. Three of these sites had dissolved oxygen levels <5 mg/L.

7. Pursuant to section 3.11 of the Listing Policy, no additional data and information are available indicating that standards are not met.
 
RWQCB Board Decision / Staff Recommendation: After review of the available data and information, Water Board staff concludes that the water body-pollutant combination should be added to the section 303(d) list because applicable water quality standards are exceeded and a pollutant contributes to or causes the problem. Eutrophic conditions, as indicated by low dissolved oxygen, supersaturated dissolved oxygen, high nitrate levels, and altered benthic macroinvertebrate assemblages, are present at multiple locations in the watershed during every season, suggesting a widespread problem. Eutrophication results in low levels of dissolved oxygen that can adversely affect aquatic biota. Two important factors are likely to be responsible for eutrophication in Arroyo Las Positas: (1) high nutrient loading, and (2) a lack of canopy cover over the stream as a result of loss of riparian vegetation.
 
SWRCB Board Decision / Staff Recommendation:
 
USEPA Decision:
 
 
Lines of Evidence (LOEs) for Decision ID 7578
 
LOE ID: 4810
 
Pollutant: Low Dissolved Oxygen
LOE Subgroup: Pollutant-Water
Matrix: Water
Fraction: None
 
Beneficial Use: Warm Freshwater Habitat
Aquatic Life Use: Wildlife Habitat
 
Number of Samples: 9
Number of Exceedances: 4
 
Data and Information Type: PHYSICAL/CHEMICAL MONITORING
Data Used to Assess Water Quality: Data used to evaluate dissolved oxygen were collected by SWAMP in 2002. In 4 out of 9 deployments, minimum dissolved oxygen levels fell below the objective of 5 mg/L. Minimum values were nearly anoxic (0.56 mg/L) at one site in the summer season. Low dissolved oxygen concentrations generally occurred during the night and early morning hours.
Continuous depressed levels of dissolved oxygen (< 5.0 mg/L) lasted from over 5 hours (dry season, downstream location) to 12 hours and 45 minutes (dry season, Altamont Creek upstream of confluence with Arroyo Las Positas).

Dissolved oxygen levels fell below 5 mg/L during one additional deployment in the upstream section of Arroyo Las Positas. The longest duration of suppressed oxygen levels lasted for over 12 hours and the patterns of dissolved oxygen concentrations at this location followed closely that of Altamont Creek. Although these measurements support the listing decision and indicate that dissolved oxygen levels are the cause of the impairment, they cannot be used directly because of the marginal (by +/- 0.4%) exceedance of the quality assurance requirements.
Data Reference: Water Quality Monitoring and Bioassessment in Nine San Francisco Bay Region Watersheds: Walker Creek, Lagunitas Creek, San Leandro Creek, Wildcat Creek/San Pablo Creek, Suisun Creek, Arroyo Las Positas, Pescadero Creek/Butano Creek, San Gregorio Creek, and Stevens Creek/Permanente Creek. Oakland, CA: Surface Water Ambient Monitoring Program, San Francisco Bay Regional Water Quality Control Board
 
Water Quality Objective/Criterion: The numeric water quality objective for dissolved oxygen is 5.0 mg/L minimum for waters designated as warm freshwater habitat. The median dissolved oxygen concentration for any three consecutive months shall not be less than 80 percent of the dissolved oxygen content at saturation.
Objective/Criterion Reference: San Francisco Bay Basin (Region 2) Water Quality Control Plan (Basin Plan)
 
Evaluation Guideline:
Guideline Reference:
 
Spatial Representation: Dissolved oxygen was measured at five sites. Three of these sites were located on the mainstem of Arroyo Las Positas, while one site each was located on Altamont Creek and Arroyo Seco, two major tributaries. The lowest dissolved oxygen levels were measured at site ALP105 on Altamont Creek. Low dissolved oxygen levels also occurred in the mainstem of Arroyo Las Positas during the summer season.
Temporal Representation: The SWAMP Program performed continuous monitoring of dissolved oxygen at 15 minute intervals for periods of 1-2 weeks in each of three different seasons: winter (March 2002; 3 sites, 1 site meeting quality assurance requirements), spring (April 2002; 5 sites, 4 sites meeting quality assurance requirements), and summer (late June and late July 2002; 5 sites, 4 sites meeting quality assurance requirements).
Environmental Conditions: Arroyo Las Positas flows west through the eastern Livermore valley before its confluence with Arroyo Mocho in eastern Pleasanton. The lower and middle sections of Arroyo Las Positas and Altamont Creek flow through the northern portion of the city of Livermore, a city of 82,000 people. The upper watershed is primarily used for cattle grazing. The lowest and highest dissolved oxygen levels were measured in a section of Altamont Creek that contained very high amounts of benthic algae and was located downstream of a golf course and small eutrophic pond. The main stem of Arroyo Las Positas is almost completely devoid of riparian vegetation as a result of extensive channel alteration and incision.
QAPP Information: All samples were collected and analyzed using procedures comparable with the SWAMP Quality Assurance Management Plan (SWRCB 2002).
QAPP Information Reference(s): Quality Assurance Management Plan for the State of California's Surface Water Ambient Monitoring Program. Sacramento, CA. State Water Resources Control Board. SWAMP. December 2002 (1st version)

 
LOE ID: 4811
 
Pollutant: Dissolved oxygen saturation
LOE Subgroup: Pollutant-Water
Matrix: Water
Fraction: None
 
Beneficial Use: Warm Freshwater Habitat
Aquatic Life Use: Wildlife Habitat
 
Number of Samples: 9
Number of Exceedances: 5
 
Data and Information Type: PHYSICAL/CHEMICAL MONITORING
Data Used to Assess Water Quality: Data used to evaluate dissolved oxygen was collected by SWAMP. Supersaturated dissolved oxygen levels greater than 200% were observed in 5 out of 9 deployments, including a maximum value of 395%, indicating tremendous oxygen production by algae (eutrophication). Supersatured conditions always occurred during the daylight hours. The maximum diurnal range in dissolved oxygen was greater than 30 mg/L, higher than any values ever reported in the literature (Kent et al. 2005).
Data Reference: Water Quality Monitoring and Bioassessment in Nine San Francisco Bay Region Watersheds: Walker Creek, Lagunitas Creek, San Leandro Creek, Wildcat Creek/San Pablo Creek, Suisun Creek, Arroyo Las Positas, Pescadero Creek/Butano Creek, San Gregorio Creek, and Stevens Creek/Permanente Creek. Oakland, CA: Surface Water Ambient Monitoring Program, San Francisco Bay Regional Water Quality Control Board
  Algal productivity and nitrate assimilation in an effluent dominated concrete lined stream. Journal of the American Water Resources Association: 41: 1109-1128
 
Water Quality Objective/Criterion: All waters shall be maintained free of toxic substances in concentrations that are lethal to or that produce significant alterations in population or community ecology or receiving water biota.
Objective/Criterion Reference: San Francisco Bay Basin (Region 2) Water Quality Control Plan (Basin Plan)
 
Evaluation Guideline: Dissolved oxygen supersaturation above 200 percent results in mortality of fish due to gill and skin lesions from gas bubble disease (Woodbury 1942, Renfro 1963, Weitkamp and Katz 1980).
Guideline Reference: A sudden mortality of fishes acoompanying a supersaturation of oxygen in Lake Waubesa, Wisconsin. Trans. Am. Fish. Soc. 71: 112-117
  A review of dissolved gas supersaturation literature. Trans. Am. Fish. Soc. 109:659-702
  Gas-bubble mortality of fishes in Galveston Bay, Texas. Trans. Am. Fish Soc. 92:320-322
 
Spatial Representation: Dissolved oxygen was measured at five sites. Three of these sites were located on the mainstem of Arroyo Las Positas, while one site each was located on the major tributary. The highest dissolved oxygen levels were measured at site ALP105 on Altamont Creek, a major tributary to Arroyo Las Positas.
Temporal Representation: The SWAMP Program performed continuous monitoring of dissolved oxygen at 15 minute intervals for periods of 1-2 weeks in each of three different seasons: winter (March 2002; 3 sites, 1 site meeting quality assurance requirements), spring (April 2002; 5 sites, 4 sites meeting quality assurance requirements), and summer (late June and late July 2002; 5 sites, 4 sites meeting quality assurance requirements).
Environmental Conditions: Arroyo Las Positas flows west through the eastern Livermore valley before its confluence with Arroyo Mocho in eastern Pleasanton. The lower and middle sections of Arroyo Las Positas and Altamont Creek flow through the northern portion of the city of Livermore, a city of 82,000 people. The upper watershed is primarily used for cattle grazing. The lowest and highest dissolved oxygen levels were measured in a section of Altamont Creek that contained very high amounts of benthic algae and was located downstream of a golf course and small eutrophic pond. The main stem of Arroyo Las Positas is almost completely devoid of riparian vegetation as a result of extensive channel alteration and incision.
QAPP Information: All samples were collected and analyzed using procedures comparable with the SWAMP Quality Assurance Management Plan (SWRCB 2002).
QAPP Information Reference(s): Quality Assurance Management Plan for the State of California's Surface Water Ambient Monitoring Program. Sacramento, CA. State Water Resources Control Board. SWAMP. December 2002 (1st version)

 
LOE ID: 4813
 
Pollutant: Benthic-Macroinvertebrate Bioassessments
LOE Subgroup: Population/Community Degradation
Matrix: -N/A
Fraction: None
 
Beneficial Use: Warm Freshwater Habitat
Aquatic Life Use: Wildlife Habitat
 
Number of Samples: 7
Number of Exceedances: 7
 
Data and Information Type: Benthic macroinvertebrate surveys
Data Used to Assess Water Quality: Benthic macroinvertebrates were sampled from 7 sites in the Arroyo Las Positas watershed in April 2001 by the SWAMP program. Benthic macroinvertebrate assemblage metrics were well outside the range of scores for minimally disturbed reference sites. Taxa richness scores at all 7 sampled sites in the Arroyo Las Positas watershed ranged from 11 to 16 taxa, whereas taxa richness values at reference sites ranged from 28 to 59. No taxa that are sensitive to pollution were present in any of the samples, indicating that pollution has resulted in significant alterations of community ecology.
Data Reference: Water Quality Monitoring and Bioassessment in Nine San Francisco Bay Region Watersheds: Walker Creek, Lagunitas Creek, San Leandro Creek, Wildcat Creek/San Pablo Creek, Suisun Creek, Arroyo Las Positas, Pescadero Creek/Butano Creek, San Gregorio Creek, and Stevens Creek/Permanente Creek. Oakland, CA: Surface Water Ambient Monitoring Program, San Francisco Bay Regional Water Quality Control Board
 
Water Quality Objective/Criterion: All waters shall be maintained free of toxic substances in concentrations that are lethal to or that produce significant alterations in population or community ecology or receiving water biota. In addition, the health and life history characteristics of aquatic organisms in waters affected by controllable water quality factors shall not differ significantly from those for the same waters in areas unaffected by controllable water quality factors.
Objective/Criterion Reference: San Francisco Bay Basin (Region 2) Water Quality Control Plan (Basin Plan)
 
Evaluation Guideline: Benthic macroinvertebrate assemblage metric scores that are outside the range of scores for minimally disturbed reference sites indicate significant alterations in community ecology. Taxa richness values at reference sites sampled by the SWAMP program between 2001 and 2003 ranged from 28 to 59.
Guideline Reference: Water Quality Monitoring and Bioassessment in Nine San Francisco Bay Region Watersheds: Walker Creek, Lagunitas Creek, San Leandro Creek, Wildcat Creek/San Pablo Creek, Suisun Creek, Arroyo Las Positas, Pescadero Creek/Butano Creek, San Gregorio Creek, and Stevens Creek/Permanente Creek. Oakland, CA: Surface Water Ambient Monitoring Program, San Francisco Bay Regional Water Quality Control Board
 
Spatial Representation: Benthic macroinvertebrates were sampled from 7 sites throughout the watershed. Five sites were sampled on the main stem of Arroyo Las Positas, and 2 sites were sampled on Altamont Creek, the major perennial tributary of Arroyo Las Positas.
Temporal Representation: Benthic macroinvertebrates were sampled once in April, 2001.
Environmental Conditions: Arroyo Las Positas flows west through the eastern Livermore valley before its confluence with Arroyo Mocho in eastern Pleasanton. The lower and middle sections of Arroyo Las Positas and Altamont Creek flow through the northern portion of the city of Livermore, a city of 82,000 people. The upper watershed is primarily used for cattle grazing. The main stem of Arroyo Las Positas is almost completely devoid of riparian vegetation as a result of extensive channel alteration and incision.
QAPP Information: All samples were collected and analyzed using procedures comparable with the SWAMP Quality Assurance Management Plan (SWRCB 2002).
QAPP Information Reference(s): Quality Assurance Management Plan for the State of California's Surface Water Ambient Monitoring Program. Sacramento, CA. State Water Resources Control Board. SWAMP. December 2002 (1st version)

 
LOE ID: 4812
 
Pollutant: Nitrate
LOE Subgroup: Pollutant-Water
Matrix: Water
Fraction: Dissolved
 
Beneficial Use: Warm Freshwater Habitat
Aquatic Life Use: Wildlife Habitat
 
Number of Samples: 8
Number of Exceedances: 8
 
Data and Information Type: PHYSICAL/CHEMICAL MONITORING
Data Used to Assess Water Quality: Eight out of 8 nitrate samples had concentrations greater than 0.5 mg/L. Eight out of 8 nitrate samples also had concentrations greater than 2.0 mg/L. The highest concentrations (8.04 mg/L and 6.52 mg/L) occurred at the same site (ALP110; Arroyo Las Positas, just upstream of Altamont Creek) in January and April 2002, and were among the highest nitrate concentrations measured by SWAMP in the SF Bay Region.
Data Reference: Water Quality Monitoring and Bioassessment in Nine San Francisco Bay Region Watersheds: Walker Creek, Lagunitas Creek, San Leandro Creek, Wildcat Creek/San Pablo Creek, Suisun Creek, Arroyo Las Positas, Pescadero Creek/Butano Creek, San Gregorio Creek, and Stevens Creek/Permanente Creek. Oakland, CA: Surface Water Ambient Monitoring Program, San Francisco Bay Regional Water Quality Control Board
 
Water Quality Objective/Criterion: Waters shall not contain biostimulatory substances in concentrations that promote aquatic growths to the extent that such growths cause nuisance or adversely affect beneficial uses

All waters shall be maintained free of toxic substances in concentrations that are lethal to or that produce significant alterations in population or community ecology or receiving water biota.
Objective/Criterion Reference: San Francisco Bay Basin (Region 2) Water Quality Control Plan (Basin Plan)
 
Evaluation Guideline: 1. Total nitrogen levels greater than 0.5 mg/L can result in large masses of nuisance algae unless other factors limit algae growth (Bowie et al. 1985; Biggs 2000). Since nitrate is one component of total nitrogen in water, nitrate levels should also be less than 0.5 mg/L.
2. Nitrate (NO3-N) concentrations above 2.0 mg/L can cause toxicity in a variety of freshwater organisms (Camargo et al. 2005).
Guideline Reference: Eutrophication of streams and rivers: dissolved nutrient-chlorophyll relationships for benthic algae. J. N. Am. Benthol. Soc. 19:17-31
  Rates, Constant, and Kinetics Formulations in Surface Water Quality Modeling, 2nd Edition. EPA/600/3-85/040. USEPA Environmental Research Laboratory, Athens, GA
  Nitrate toxicity to aquatic animals: a review with new data for freshwater invertebrates. Chemosphere 58:1255-67
 
Spatial Representation: Nitrate was sampled at four sites in the watershed, including two main stem sites and two sites on Altamont Creek, an important tributary.
Temporal Representation: Water samples were collected for nitrate analyses during three sampling events. The same four sites were sampled during each sampling event. Data are evaluated from the January 2002 and April 2002 sampling events only. Laboratory methods used on samples collected during September 2001 did not meet quality assurance requirements, so this data has not been considered.
Environmental Conditions: Arroyo Las Positas flows west through the eastern Livermore valley before its confluence with Arroyo Mocho in eastern Pleasanton. The lower and middle sections of Arroyo Las Positas and Altamont Creek flow through the northern portion of the city of Livermore, a city of 82,000 people. The upper watershed is primarily used for cattle grazing. The main stem of Arroyo Las Positas is almost completely devoid of riparian vegetation as a result of extensive channel alteration and incision.
QAPP Information: All samples were collected and analyzed using procedures comparable with the SWAMP Quality Assurance Management Plan (SWRCB 2002).
QAPP Information Reference(s): Quality Assurance Management Plan for the State of California's Surface Water Ambient Monitoring Program. Sacramento, CA. State Water Resources Control Board. SWAMP. December 2002 (1st version)