# Draft 2008 California 303(d)/305(b) Integrated Report

# Supporting Information

## Regional Board 5 - Central Valley Region

Water Body Name: | Delta Waterways (export area)
Water Body ID: | CAE5440000020041005165433
Water Body Type: | Estuary

DECISION ID | 6307
Pollutant: | Chlorpyrifos
Final Listing Decision: | List on 303(d) list (being addressed by USEPA approved TMDL)
Last Listing Cycle's Final Listing Decision: | List on 303(d) list (TMDL required list)(2006)
Revision Status | Revised
Sources: | Agriculture | Urban Runoff/Storm Sewers
TMDL Name: | Delta Diazinon and Chlorpyrifos Project
TMDL Project Code: | 185
Date TMDL Approved by USEPA: | 10/10/2007
Impairment from Pollutant or Pollution: | Pollutant
Weight of Evidence: | There is sufficient justification to place this pollutant the Being Addressed portion of the 303(d) list because a TMDL has been completed and approved by RWQCB and USEPA, and is expected to result in attainment of the standard.. The Sacramento San Joaquin Delta Diazinon and Chlorpyrifos TMDL has been approved by the Central Valley Water Board in 2006 and approved by USEPA on 10 October 2007.
RWQCB Board Decision / Staff Recommendation: | After review of the available data and information, RWQCB staff concludes that the water body-pollutant combination should be placed on the Being Addressed portion of the section 303(d) list because a TMDL has been completed and approved by USEPA and is expected to result in attainment of the standard.
SWRCB Board Decision / Staff Recommendation: | N/A
USEPA Decision: |

Lines of Evidence (LOEs) for Decision ID 6307

LOE ID: | 4179
Pollutant: | Chlorpyrifos
LOE Subgroup: | Pollutant-Water
Matrix: | Water
Fraction: | Not Recorded
Beneficial Use: | Warm Freshwater Habitat
Number of Samples: | 0
Number of Exceedances: | 0
Data and Information Type: | Not Specified
Data Used to Assess Water Quality: | Unspecified--This LOE is a placeholder to support a 303(d) listing decision made prior to 2006.
Data Reference: | Placeholder reference pre-2006 303(d)
Water Quality Objective/Criterion: | Unspecified
Objective/Criterion Reference: | Placeholder reference pre-2006 303(d)
Evaluation Guideline: | Unspecified
Guideline Reference: | Placeholder reference pre-2006 303(d)
Spatial Representation: | Unspecified
Temporal Representation: | Unspecified
Environmental Conditions: | Unspecified
QAPP Information: | Unspecified
QAPP Information Reference(s):

DECISION ID | 6340
Pollutant: | Diazinon
Final Listing Decision: | List on 303(d) list (being addressed by USEPA approved TMDL)
Last Listing Cycle's Final Listing Decision: | List on 303(d) list (TMDL required list)(2006)
Revision Status | Revised
Sources: | Agriculture | Urban Runoff/Storm Sewers
TMDL Name: | Delta Diazinon and Chlorpyrifos Project
TMDL Project Code: | 185
Date TMDL Approved by USEPA: | 10/10/2007
Impairment from Pollutant or Pollution: | Pollutant
Weight of Evidence: | There is sufficient justification to place this pollutant the Being Addressed portion of the 303(d) list because a TMDL has been completed and approved by RWQCB and USEPA, and is expected to result in attainment of the standard.. The Sacramento San Joaquin Delta Diazinon and Chlorpyrifos TMDL has been approved by the Central Valley Water Board in 2006 and approved by USEPA on 10 October 2007.
RWQCB Board Decision / Staff Recommendation: | After review of the available data and information, RWQCB staff concludes that the water body-pollutant combination should be placed on the Being Addressed portion of the section 303(d) list because a TMDL has been completed and approved by USEPA and is expected to result in attainment of the standard.
SWRCB Board Decision / Staff Recommendation: | N/A
USEPA Decision: |

Lines of Evidence (LOEs) for Decision ID 6340

LOE ID: | 4181
Pollutant: | Diazinon
LOE Subgroup: | Pollutant-Water
Matrix: | Water
Fraction: | Not Recorded
Beneficial Use: | Warm Freshwater Habitat
Number of Samples: | 0
Number of Exceedances: | 0
Data and Information Type: | Not Specified
Data Used to Assess Water Quality: | Unspecified--This LOE is a placeholder to support a 303(d) listing decision made prior to 2006.
Data Reference: | Placeholder reference pre-2006 303(d)
Water Quality Objective/Criterion: | Unspecified
Objective/Criterion Reference: | Placeholder reference pre-2006 303(d)
Evaluation Guideline: | Unspecified
Guideline Reference: | Placeholder reference pre-2006 303(d)
Spatial Representation: | Unspecified
Temporal Representation: | Unspecified
Environmental Conditions: | Unspecified
QAPP Information: | Unspecified
QAPP Information Reference(s):

DECISION ID | 6344
Pollutant: | Mercury
Final Listing Decision: | Do Not Delist from 303(d) list (TMDL required list)
Last Listing Cycle's Final Listing Decision: | List on 303(d) list (TMDL required list)(2006)
Revision Status | Original
Sources: | Resource Extraction
Expected TMDL Completion Date: | 2009
Impairment from Pollutant or Pollution: | Pollutant
Weight of Evidence: | This pollutant is being considered for removal from the section 303(d) list under sections 4.1 and 4.5 of the Listing Policy. Under this section a single line of evidence is necessary to assess listing status. One line of evidence is available in the administrative record to assess pollutant. Based on the readily available data and information, the weight of evidence indicates that there is sufficient justification against removing this water segment-pollutant combination from the section 303(d) list. This conclusion is based on the staff findings that: 1. The data used satisfies the data quality requirements of section 6.1.4 of the Policy. 2. The data used satisfies the data quantity requirements of section 6.1.5 of the Policy. 3. Pursuant to section 4.11 of the Listing Policy, no additional data and information are available indicating that standards are met.
RWQCB Board Decision / Staff Recommendation: | After review of the available data and information, RWQCB staff concludes that the water body-pollutant combination should not be removed from the section 303(d) list because applicable water quality standards for the pollutant are being exceeded.
SWRCB Board Decision / Staff Recommendation: | N/A
USEPA Decision: |

Lines of Evidence (LOEs) for Decision ID 6344

LOE ID: | 4184
Pollutant: | Mercury
LOE Subgroup: | Pollutant-Tissue
Matrix: | Tissue
Fraction: | Not Recorded
Beneficial Use: | Commercial or recreational collection of fish, shellfish, or organisms
Number of Samples: | 0
Number of Exceedances: | 0
Data and Information Type: | Not Specified
Data Used to Assess Water Quality: | Unspecified--This LOE is a placeholder to support a 303(d) listing decision made prior to 2006.
Data Reference: | Placeholder reference pre-2006 303(d)
Water Quality Objective/Criterion: | Unspecified
Objective/Criterion Reference: | Placeholder reference pre-2006 303(d)
Evaluation Guideline: | Unspecified
Guideline Reference: | Placeholder reference pre-2006 303(d)
Spatial Representation: | Unspecified
Temporal Representation: | Unspecified
Environmental Conditions: | Unspecified
QAPP Information: | Unspecified
QAPP Information Reference(s):

DECISION ID | 6339
Pollutant: | DDT
Final Listing Decision: | List on 303(d) list (TMDL required list)
Last Listing Cycle's Final Listing Decision: | List on 303(d) list (TMDL required list)(2006)
Revision Status | Original
Sources: | Agriculture
Expected TMDL Completion Date: | 2011
Impairment from Pollutant or Pollution: | Pollutant
Weight of Evidence: | 303(d) listing decisions made prior to 2006 were not held in an assessment database. The Regional Boards will update this decision when new data and information become available and are assessed.
RWQCB Board Decision / Staff Recommendation: | No new data were assessed for 2008. The Regional Board will update this decision when new data and information become available and are assessed.
SWRCB Board Decision / Staff Recommendation: | N/A
USEPA Decision: |

Lines of Evidence (LOEs) for Decision ID 6339

LOE ID: | 4180
Pollutant: | DDT
LOE Subgroup: | Pollutant-Tissue
Matrix: | Tissue
Fraction: | Not Recorded
Beneficial Use: | Commercial or recreational collection of fish, shellfish, or organisms
Number of Samples: | 0
Number of Exceedances: | 0
Data and Information Type: | Not Specified
Data Used to Assess Water Quality: | Unspecified--This LOE is a placeholder to support a 303(d) listing decision made prior to 2006.
Data Reference: | Placeholder reference pre-2006 303(d)
Water Quality Objective/Criterion: | Unspecified
Objective/Criterion Reference: | Placeholder reference pre-2006 303(d)
Evaluation Guideline: | Unspecified
Guideline Reference: | Placeholder reference pre-2006 303(d)
Spatial Representation: | Unspecified
Temporal Representation: | Unspecified
Environmental Conditions: | Unspecified
QAPP Information: | Unspecified
QAPP Information Reference(s):

DECISION ID | 6342
Pollutant: | Electrical Conductivity
Final Listing Decision: | List on 303(d) list (TMDL required list)
Last Listing Cycle's Final Listing Decision: | List on 303(d) list (TMDL required list)(2006)
Revision Status | Original
Sources: | Agriculture
Expected TMDL Completion Date: | 2019
Impairment from Pollutant or Pollution: | Pollutant
Weight of Evidence: | 303(d) listing decisions made prior to 2006 were not held in an assessment database. The Regional Boards will update this decision when new data and information become available and are assessed.
RWQCB Board Decision / Staff Recommendation: | No new data were assessed for 2008. The Regional Board will update this decision when new data and information become available and are assessed.
SWRCB Board Decision / Staff Recommendation: | N/A
USEPA Decision: |

Lines of Evidence (LOEs) for Decision ID 6342

LOE ID: | 4182
Pollutant: | Electrical Conductivity
LOE Subgroup: | Pollutant-Water
Matrix: | Water
Fraction: | Not Recorded
Beneficial Use: | Agricultural Supply
Number of Samples: | 0
Number of Exceedances: | 0
Data and Information Type: | Not Specified
Data Used to Assess Water Quality: | Unspecified--This LOE is a placeholder to support a 303(d) listing decision made prior to 2006.
Data Reference: | Placeholder reference pre-2006 303(d)
Water Quality Objective/Criterion: | Unspecified
Objective/Criterion Reference: | Placeholder reference pre-2006 303(d)
Evaluation Guideline: | Unspecified
Guideline Reference: | Placeholder reference pre-2006 303(d)
Spatial Representation: | Unspecified
Temporal Representation: | Unspecified
Environmental Conditions: | Unspecified
QAPP Information: | Unspecified
QAPP Information Reference(s):

DECISION ID | 6343
Pollutant: | Group A Pesticides
Final Listing Decision: | List on 303(d) list (TMDL required list)
Last Listing Cycle's Final Listing Decision: | List on 303(d) list (TMDL required list)(2006)
Revision Status | Original
Sources: | Agriculture
Expected TMDL Completion Date: | 2011
Impairment from Pollutant or Pollution: | Pollutant
Weight of Evidence: | 303(d) listing decisions made prior to 2006 were not held in an assessment database. The Regional Boards will update this decision when new data and information become available and are assessed.
RWQCB Board Decision / Staff Recommendation: | No new data were assessed for 2008. The Regional Board will update this decision when new data and information become available and are assessed.
SWRCB Board Decision / Staff Recommendation: | N/A
USEPA Decision: |

Lines of Evidence (LOEs) for Decision ID 6343

LOE ID: | 4183
Pollutant: | Group A Pesticides
LOE Subgroup: | Pollutant-Tissue
Matrix: | Tissue
Fraction: | Not Recorded
Beneficial Use: | Commercial or recreational collection of fish, shellfish, or organisms
Number of Samples: | 0
Number of Exceedances: | 0
Data and Information Type: | Not Specified
Data Used to Assess Water Quality: | Unspecified--This LOE is a placeholder to support a 303(d) listing decision made prior to 2006.
Data Reference: | Placeholder reference pre-2006 303(d)
Water Quality Objective/Criterion: | Unspecified
Objective/Criterion Reference: | Placeholder reference pre-2006 303(d)
Evaluation Guideline: | Unspecified
Guideline Reference: | Placeholder reference pre-2006 303(d)
Spatial Representation: | Unspecified
Temporal Representation: | Unspecified
Environmental Conditions: | Unspecified
QAPP Information: | Unspecified
QAPP Information Reference(s):

DECISION ID | 6703
Pollutant: | Invasive Species
Final Listing Decision: | List on 303(d) list (TMDL required list)
Last Listing Cycle's Final Listing Decision: | List on 303(d) list (TMDL required list)(2006)
Revision Status | Original
Sources: | Source Unknown
Expected TMDL Completion Date: | 2019
Impairment from Pollutant or Pollution: | Pollutant
Weight of Evidence: | This pollutant is being considered for placement on the section 303(d) list under section 3.10 of the Listing Policy. Under section 3.10 one line of evidence is necessary to assess listing status. Two lines of evidence are available in the administrative record to assess this pollutant. There have been numerous studies since the late 1960's showing sharp declines in phytoplankton biomass and in native species, such as the delta smelt, which has declined ten-fold over the last 20 years. Non-native species are believed to be responsible for this alteration in the Delta food web and extirpating native species. Based on the readily available data and information, the weight of evidence indicates that there is sufficient justification in favor of placing this water segment-pollutant combination on the section 303(d) list in the Water Quality Limited Segments category. This conclusion is based on the staff findings that: 1. There are numerous studies since the late 1960's. 2. Baseline data is from data acquired from these earlier studies. 3. Trends were determined using statistical analyses on graphs and tables. 4. Summer chlorophyll-a decreased markedly after invasion of the non-native Asian clam. Phytoplankton is a significant source during the spring and summer for many species in the Delta. 5. Phytoplankton biomass has declined over the past few decades, affecting food biomass availability for higher tropic levels. Some non-native species compete with zooplankton for food, or alter species composition of the food web. In areas where non-natives are abundant, native fishes are rare or absent. 6. It cannot be determined if the trend in water quality is expected to meet water standards by the next listing cycle. 7. Pursuant to section 3.11 of the Listing Policy, no additional data and information are available indicating that standards are not met.
RWQCB Board Decision / Staff Recommendation: | This is a decision made by the State Water Resources Control Board and approved by the USEPA in 2006 . No new data were assessed by the Regional Board for 2008. The decision has not changed.
SWRCB Board Decision / Staff Recommendation: |
USEPA Decision: |

Lines of Evidence (LOEs) for Decision ID 6703

LOE ID: | 586
Pollutant: | Invasive Species
LOE Subgroup: | Population/Community Degradation
Matrix: | Water
Fraction: | None
Beneficial Use: | Warm Freshwater Habitat
Number of Samples: | 0
Number of Exceedances: | 0
Data and Information Type: | Not Specified
Data Used to Assess Water Quality: | The Asian clam was the species assessed in support of this listing. Thousands of chlorophyll-a measurements have been made in the Delta since the late 1960s and 55-93% of these measurements, depending on the year, are below 10 ug/L. Growth rates of some primary consumers are closely tied to phytoplankton availability below about 10ug/L. There is a statistically significant downward trend of phytoplankton from 1975-1995 (Jassby et al., 2003). In 1986 the non-native Asian clam invaded Suisun Bay. The Asian clam is a consumer of phytoplankton, changing phytoplankton dynamics in Suisun Bay and the western Delta. Summer chlorophyll decreased markedly after the Asian clam invaded and phytoplankton biomass has declined over the past few decades, affecting food biomass availability for higher tropic levels of the Delta. Some non-native species compete with zooplankton for food, or alter species composition of the food web, affecting native species survival. Recent studies in the central Delta show that introduced fishes dominate (USFWS, 2004. Five-Year Review of Recovery Plan for Delta Smelt. Federal Register 68(148):45270-45271). In areas where non-natives are abundant, native fishes are rare or absent. Over the last 20 years, the native delta smelt population has taken a ten-fold decline in numbers, due in part by non-native species predation and lack of adequate food supply (USFWS, 2004).
Data Reference: | Placeholder reference 2006 303(d)
Water Quality Objective/Criterion: | All waters shall be maintained free of toxic substances in concentrations that produce detrimental physiological responses in human, plant, animal, or aquatic life. This objective applies regardless of whether the toxicity is caused by a single substance or the interactive effect of multiple substances. Compliance with this objective will be determined by analyses of indicator organisms, species diversity, population density, growth anomalies, and biotoxicity tests of appropriate duration or other methods as specified by the Regional Water Board. Taken from Region 5 Basin Plan, Page III-8.00, Water Quality Objectives.
Objective/Criterion Reference: | Placeholder reference 2006 303(d)
Evaluation Guideline: |
Guideline Reference:
Spatial Representation: | The Sacramento-San Joaquin Delta extends from Chipps Island to include leveed and flooded islands; river channels; sloughs; and tidal marshes. Stations were distributed throughout the Delta for sampling by the Dept. of Water Resources to assess water quality, some since the late 1960's.
Temporal Representation: | Numerous studies since the late 1960s.
Environmental Conditions: | Changes in relative diversity and abundance of native species may also be driven by habitat alteration, flow changes, or hydromodification.
QAPP Information: | Peer Reviewed Journal Article and Reports.
QAPP Information Reference(s):
LOE ID: | 585
Pollutant: | Invasive Species
LOE Subgroup: | Population/Community Degradation
Matrix: | Not Specified
Fraction: | None
Beneficial Use: | Warm Freshwater Habitat
Number of Samples: | 0
Number of Exceedances: | 0
Data and Information Type: | Fish surveys
Data Used to Assess Water Quality: | The species assessed in support of this listing are: fathead minnow, bigscale logperch, catfish, carp, and brook trout. American shad were planted in the Sacramento River in 1871, and by 1879 a commercial fishery had developed. The next successful introductions, in 1872, were carp and brook trout. In 1874, tank cars brought in four species of catfish and two species of black bass. The striped bass became one of the most successful introductions. It became one of the most abundant fish species in the Sacramento-San Joaquin Delta following the planting of a total of 432 fish in 1879 and 1882. The bigscale logperch was introduced into the Central Valley when ponds overflowed during a wet year at Beale Air Force Base. In the Central Valley, the few streams that are now dominated by fathead minnows were probably originally dominated by California roach (Moyle, P.B. 1976).
Data Reference: | Placeholder reference 2006 303(d)
Water Quality Objective/Criterion: |
Objective/Criterion Reference:
Evaluation Guideline: |
Guideline Reference:
Spatial Representation: | The Sacramento-San Joaquin Delta extends from Chipps Island to include leveed and flooded islands; river channels; sloughs; and tidal marshes.
Temporal Representation: |
Environmental Conditions: | Changes in relative diversity and abundance of native species may also be driven by habitat alteration, flow changes, or hydromodification.
QAPP Information: | Peer Reviewed Journal Article and Reports.
QAPP Information Reference(s):

DECISION ID | 6512
Pollutant: | Unknown Toxicity
Final Listing Decision: | List on 303(d) list (TMDL required list)
Last Listing Cycle's Final Listing Decision: | List on 303(d) list (TMDL required list)(2006)
Revision Status | Original
Sources: | Source Unknown
Expected TMDL Completion Date: | 2019
Impairment from Pollutant or Pollution: | Pollutant
Weight of Evidence: | 303(d) listing decisions made prior to 2006 were not held in an assessment database. The Regional Boards will update this decision when new data and information become available and are assessed.
RWQCB Board Decision / Staff Recommendation: | No new data were assessed for 2008. The Regional Board will update this decision when new data and information become available and are assessed.
SWRCB Board Decision / Staff Recommendation: | N/A
USEPA Decision: |

Lines of Evidence (LOEs) for Decision ID 6512

LOE ID: | 4185
Pollutant: | Unknown Toxicity
LOE Subgroup: | Toxicity
Matrix: | Water
Fraction: | Not Recorded
Beneficial Use: | Warm Freshwater Habitat
Number of Samples: | 0
Number of Exceedances: | 0
Data and Information Type: | Not Specified
Data Used to Assess Water Quality: | Unspecified--This LOE is a placeholder to support a 303(d) listing decision made prior to 2006.
Data Reference: | Placeholder reference pre-2006 303(d)
Water Quality Objective/Criterion: |
Objective/Criterion Reference:
Evaluation Guideline: |
Guideline Reference:
Spatial Representation: | Unspecified
Temporal Representation: | Unspecified
Environmental Conditions: | Unspecified
QAPP Information: | Unspecified
QAPP Information Reference(s):